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- 1.DAISIE::archipelago_dataPhysical data on 41 archipelagos
- 2.DAISIE::archipelagos41DAISIE datalist object including bird phylogenetic data and physical data for 41 archipelagos
- 3.DAISIE::Bats_GreaterAntillesColonization and branching times of Noctilionoid bats from the Greater Antilles.
- 4.DAISIE::Biwa_datalistColonization and branching times of 68 fish clades.
- 5.DAISIE::frogs_datalistColonization and branching times of 5 Eleutherodactylus clades from Hispaniola island.
- 6.DAISIE::frogs_datatableColonization and branching times of 5 Eleutherodactylus (frogs) clades from the island of Hispaniola.
- 7.DAISIE::frogs_sim_datalistColonization and branching times of a data set simulated with the MLE parameters of frogs_datalist
- 8.DAISIE::Galapagos_datalistColonization and branching times of 8 terrestrial avifaunal clades in list format, accepted by DAISIE_ML and DAISIE_loglik_all
- 9.DAISIE::Galapagos_datalist_2typesColonization and branching times of 8 terrestrial avifaunal clades in list format, accepted by DAISIE_ML and DAISIE_loglik_all
- 10.DAISIE::Galapagos_datatableColonization and branching times of 8 terrestrial avifaunal Galápagos clades in table format.
- 11.DAISIE::islands_10reps_RAW1000 islands in RAW format simulated with the ML parameters of the CR model for the Galapagos data.
- 12.DAISIE::islands_1type_1000reps1000 islands in DAISIE format simulated with the ML parameters of the CR model for the Galapagos data
- 13.DAISIE::islands_2types_1000reps1000 islands in DAISIE format simulated with the ML parameters of the CR_lamc_mu_K model for the Galapagos data (2 types of species)
- 14.DAISIE::Macaronesia_datalistColonization and branching times of terrestrial avifaunal clades from Azores, Canary Islands, Cape Verde and Madeira in list format, accepted by DAISIE_ML and DAISIE_loglik_all
- 15.DAISIE::made_up_datalistColonization and branching times of artificial data in list format accepted by DAISIE_ML and DAISIE_loglik_all
- 16.DAISIE::NewZealand_birds_datalistColonization and branching times of New Zealand birds.
- 17.DAISIE::stac_tableExplanatory table on meaning and use of 'stac' settings
- 18.DAMOCLES::NWPrimates_dataDated phylogenetic tree of the New World Primates in nexus format and presence-absence matrix for species in Manu
- 19.SADISA::datasetsData sets of various tropical forest communities
- 20.SADISA::fitresultsMaximum likelihood estimates and corresponding likelihood values for various fits to various tropical forest communities
- 21.secsse::example_phy_GeoSSEA phylogeny with traits at the tips
- 22.secsse::phylo_vignetteA phylogenetic reconstuction to run the vignette
- 23.secsse::traitsA table with trait info to run the vignette